Primer | Sequence (5' to 3') | Target | Reference |
---|---|---|---|
Integrons | |||
5'-CS 3'-CS | GGCATCCAAGCAGCAAG AAGCAGACTTGACCTGA | Class 1 integron | 11 |
hep74 hep51 | CGGGATCCCGGACGGCATGCACGATTTGTA GATGCCATCGCAAGTACGAG | Class 2 integron | 11 |
β-Lactamases | |||
TEM-F TEM-R | ATAAAATTCTTGAAGACGAAA GACAGTTACCAATGCTTAATC | bla TEM | 11 |
SHV-F SHV-R | TT ATCTCCCTGTTAGCCACC GATTTGCTGATTTCGCTCGG | bla SHV | 11 |
OXA-F OXA-R | TCAACTTTCAAGATCGCA GTGTGTTTAGAATGGTGA | bla OXA | 11 |
CTX-M-F CTX-M-R | CGCTTTGCGATGTGCAG ACCGCGATATCGTTGGT | bla CTX-M | 11 |
CTX-M-F2 CTX-M-R2 | CCAGAATAAGGAATCCCATG GCCGTCTAAGGCGATAAAC | whole blaCTX-M | 11 |
CMY-F CMY-R | GACAGCCTCTTTCTCCACA TGGAACGAAGGCTACGTA | bla CMY | 11 |
Plasmid-mediated quiniolone resistance | |||
qnrA-F qnrA-R | ATTTCTCACGCCAGGATTTG GATCGGCAAAGGTTAGGTCA | qnrA | 19 |
qnrB-F qnrB-R | GATCGTGAAAGCCAGAAAGG ACGATGCCTGGTAGTTGTCC | qnrB | 19 |
qnrS-F qnrS-R | ACGACATTCGTCAACTGCAA TAAATTGGCACCCTGTAGGC | qnrS | 19 |